Center for Integrated Bioinformatics

School Of Biomedical Engineering, Science & Health Systems

       Drexel University

Research

Switch-like genes populate cell communication pathways and are enriched for extracellular proteins.

Ertel A, Tozeren A.

 BMC Genomics. 2008 Jan 4;9(1):3 [Epub ahead of print]

PMID: 18177501

Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets.

Gormley M, Dampier W, Ertel A, Karacali B, Tozeren A.

BMC Bioinformatics. 2007 Oct 26;8(1):415 [Epub ahead of print]

PMID: 17963508

Automated recognition of cell phenotypes in histology images based on membrane- and nuclei-targeting biomarkers.

Karaçali B, Vamvakidou AP, Tözeren A.

BMC Med Imaging. 2007 Sep 6;7:7.

PMID: 17822559

Mechanical force modulates global gene expression and beta-catenin signaling in colon cancer cells.

Avvisato CL, Yang X, Shah S, Hoxter B, Li W, Gaynor R, Pestell R, Tozeren A, Byers SW.

J Cell Sci. 2007 Aug 1;120(Pt 15):2672-82. Epub 2007 Jul 17.

PMID: 17635998

Signaling perturbations induced by invading H. pylori proteins in the host epithelial cells: a mathematical modeling approach.

Dampier W, Tozeren A.

J Theor Biol. 2007 Sep 7;248(1):130-44. Epub 2007 Mar 18.

PMID: 17559886

Automated detection of regions of interest for tissue microarray experiments: an image texture analysis.

Karaçali B, Tözeren A.

BMC Med Imaging. 2007 Mar 9;7:2.

PMID: 17349041

Heterogeneous breast tumoroids: An in vitro assay for investigating cellular heterogeneity and drug delivery.

Vamvakidou AP, Mondrinos MJ, Petushi SP, Garcia FU, Lelkes PI, Tozeren A.

J Biomol Screen. 2007 Feb;12(1):13-20. Epub 2006 Dec 8.

PMID: 17166827

Pathway-specific differences between tumor cell lines and normal and tumor tissue cells.

Ertel A, Verghese A, Byers SW, Ochs M, Tozeren A.

Mol Cancer. 2006 Nov 2;5(1):55.

PMID: 17081305

Large-scale computations on histology images reveal grade-differentiating parameters for breast cancer.

Petushi S, Garcia FU, Haber MM, Katsinis C, Tozeren A.

BMC Med Imaging. 2006 Oct 27;6:14.

PMID: 17069651

Origins and evolution of cell phenotypes in breast tumors.

Tözeren A, Coward CW, Petushi SP.

J Theor Biol. 2005 Mar 7;233(1):43-54. Epub 2004 Dec 10.

PMID: 15615618